species:   Opsin
pid:       PID1919
parent:    n_os_milR_34
paralog:   
locus:     JAAVMX010000003.1:14857696-14857973
matures:   ['UUGCUCUCGAGCUUUGGU', 'CCAGGUUGGGAGGAAUU']
srr:       SRR12952902
genome:    /Users/jax/+Genomes/Fungal_genomes/Opsin.GCA_012934285.1_ASM1293428v1_genomic.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Zhang2021-wd.SRR12952902.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Zhang2021-wd.SRR12952902.cram JAAVMX010000003.1:14857696-14857973

5816 out of bounds
15035 alignments
489 proper strand
237 stranded perfect matches

     ********************                                                                                                                                                                                                                                     *******************     
CGUUCAAUUGCUCUCGAGCUUUGGUCACAAGGCAGGCCGAUCAAUAAGAUUCUAAAGAGGGCUGGGAUUAGGGGAUGGGAUGCAAGGUAAUAGCACCCACACCACUCCCGAGGCUUCAAAAAACCGGAUAAAGAAGGCAGGCGGCAACGGCUAUAAAGAGGGCACAGCCCCACCGAUGCUCUCUGACAAAGACCAAGAGGCUCUUUAUGACGAGAUUGAGGCAUAUUUAGCAGGGCCAACGGACUGUUUAAAUGACCCAGGUUGGGAGGAAUUAGACG
((((.((((.(((((((.((..(((((..((((((.((((((.....)))......((((.((((((....((..((((.(((.........)))))))..))..)))).)).))))......((..........))((((.((((.(((.........((((...))))..))).)))).)))).............((((((.((((.(........).))))......))))))..))).))))))...))))).)).))))))).)))).))))
-------UUGCUCUCGAGCUUUGGU------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=18 a=0 c
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAGGUUGGGAGGAAUU----- l=17 a=0 c*
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUUAGCAGGGCCAACGGACUGUU------------------------------ l=23 a=35 ma
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAGGUUGGGAGGAAUU----- l=17 a=0 ma*

--UUCAAUUGCUCUCGAGCUUUGGUC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ l=24 a=1 
--UUCAAUUGCUCUCGAGCUUUGGUCACA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=27 a=1 
--UUCAAUUGCUCUCGAGCUUUGGUCACAAGGCAGGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=35 a=1 
------AUUGCUCUCGAGCUUUGGUCACg--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=23 a=1 
-------UUGCUCUCGAGCUUUGGUCACA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=22 a=1 
-------UUGCUCUCGAGCUUUGGUCACAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=23 a=1 
--------UGCUCUCGAGCUUUGGUCACAAGGg----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=25 a=1 
-------------UCGAGCUUUGGUCACAAGGCAGu-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=23 a=1 
-------------------UUUGGUCACAAGGCAGGCa------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ l=19 a=2 
-------------------UUUGGUCACAAGGCAGGCCG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=20 a=1 
-------------------UUUGGUCACAAGGCAGGCCGAUC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=23 a=1 
-------------------UUUGGUCACAAGGCAGGCCGAUCAAU----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=26 a=1 
-------------------UUUGGUCACAAGGCAGGCCGAUCAAc----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=26 a=1 
--------------------UUGGUCACAAGGCAGGCCGAUCAAUu---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=26 a=2 
------------------------UCACAAGGCAGGCCGAUCAAU----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=21 a=1 
------------------------UCACAAGGCAGGCCGAUCAAUA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=22 a=1 
------------------------UCACAAGGCAGGCCGAUCAAUAAGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=25 a=2 
------------------------UCACAAGGCAGGCCGAUCAAUAAGAc------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ l=26 a=3 
------------------------UCACAAGGCAGGCCGAUCAAUAAGAUU----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=27 a=1 
----------------------------AAGGCAGGCCGAUCAAUAAGAUU----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=23 a=1 
----------------------------AAGGCAGGCCGAUCAAUAAGAUUg---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=24 a=1 
-----------------------------AGGCAGGCCGAUCAAUAAGAUUCUA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=25 a=1 
---------------------------------AGGCCGAUCAAUAAGAUUCUAAu------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ l=23 a=2 
----------------------------------GGCCGAUCAAUA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=12 a=1 
------------------------------------CCGAUCAAUAAGAUUCUAAAGAc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=23 a=1 
---------------------------------------AUCAAUAAGAUUCUAAAGAGGGa------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ l=23 a=1 
---------------------------------------AUCAAUAAGAUUCUAAAGAGGGCU----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=24 a=1 
----------------------------------------UCAAUAAGAUUCUAAAGAGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=20 a=1 
----------------------------------------UCAAUAAGAUUCUAAAGAGGu------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=21 a=1 
----------------------------------------UCAAUAAGAUUCUAAAGAGGGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ l=22 a=5 
----------------------------------------UCAAUAAGAUUCUAAAGAGGGg------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ l=22 a=1 
----------------------------------------UCAAUAAGAUUCUAAAGAGGGu------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ l=22 a=3 
------------------------------------------AAUAAGAUUCUAAAGAGGGCUGa--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=23 a=1 
------------------------------------------AAUAAGAUUCUAAAGAGGGCUGc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=23 a=2 
------------------------------------------AAUAAGAUUCUAAAGAGGGCUGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=23 a=2 
------------------------------------------AAUAAGAUUCUAAAGAGGGCUGu--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=23 a=1 
------------------------------------------AAUAAGAUUCUAAAGAGGGCUGGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=24 a=1 
-------------------------------------------AUAAGAUUCUAAAGAGGGCUGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=22 a=2 
--------------------------------------------UAAGAUUCUAAAGAGGGCUG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=20 a=1 
--------------------------------------------UAAGAUUCUAgAGAGGGCUGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=21 a=1 
--------------------------------------------UAAGAUUCUAAAGAGGGCUGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=21 a=1 
--------------------------------------------UAAGAUUCUAAAGAGGGCUGGGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=23 a=1 
--------------------------------------------UAAGAcUCUAAAGAGGGCUGGGAUU----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=25 a=1 
--------------------------------------------UAAGAUUCUAAAGAGGGCUGGGAUU----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=25 a=1 
--------------------------------------------UAAGAUUCUAAAGAGGGCUGGGAUUu---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=26 a=1 
----------------------------------------------AGAUUCUAAAGAGGGCUGGGAUa----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=23 a=1 
----------------------------------------------AGAUUCUAAAGAGGGCUGGGAUU----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=23 a=1 
----------------------------------------------AGAUUCUAAAGAGGGCUGGGAUc----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=23 a=1 
----------------------------------------------AGAUUCUAAAGAGGGCUGGGAUUu---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=24 a=2 
-----------------------------------------------GAUUCUAAAGAGGGCUGGGAUU----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=22 a=1 
------------------------------------------------AUUCUAAAGAGGGCUGGGAUU----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=21 a=2 
------------------------------------------------AUUCUAAAGAGGGCUGGGAUUAGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=24 a=12 
------------------------------------------------AUUCUAAAGAGGGCUGGGAUUAGa-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=24 a=2 
------------------------------------------------AUUCUAAAGAGGGCUGGGAUUAGu-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=24 a=2 
------------------------------------------------AUUCUAAAGAGGGCUGGGAUUAGGu------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=25 a=1 
------------------------------------------------AUUCUAAAGAGGGCUGGGAUUAGGGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ l=26 a=1 
-------------------------------------------------UUCUAAAGAGGGCUGGGAUUAGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=23 a=5 
-------------------------------------------------UUCUAAAGAGGGCUGGGAUUAGu-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=23 a=5 
-------------------------------------------------UUCUAAAGAGGGCUGGGAUUAGGu------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=24 a=1 
----------------------------------------------------UAAAGAGGGCUGGGAUUAGGGGAUG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=25 a=1 
------------------------------------------------------AAGAGGGCUGGGAUUAGGGGAUGu-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=24 a=1 
-------------------------------------------------------AGAGGGCUGGGAUUAGGGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ l=19 a=1 
-------------------------------------------------------AGAGGGCUGGGAUUAGGGGAUc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=22 a=1 
---------------------------------------------------------AGGGCUGGGAUUAGGGGAUG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=20 a=1 
-------------------------------------------------------------------UUAGGGGAUGGGAUGCAgGGU---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=21 a=1 
---------------------------------------------------------------------------UGGGAUGCAAGGUAAUAGCACa------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=22 a=1 
----------------------------------------------------------------------------------CAAGGUAAUAGCACCCACACCACU---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=24 a=1 
----------------------------------------------------------------------------------CAAGGUAAUAGCACCCACACCACUCCCGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=29 a=1 
-----------------------------------------------------------------------------------AAGGUAAUAGCACCCACACCACa---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=23 a=1 
-----------------------------------------------------------------------------------AAGGUAAUAGCACCCACACCACUu--------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=24 a=1 
-----------------------------------------------------------------------------------AAGGUAAUAGCACCCACACCACUCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=25 a=1 
---------------------------------------------------------------------------------------UAAUAGCACCCACACCACUCg-------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=21 a=1 
------------------------------------------------------------------------------------------UAGCACCCACACCACUCCCGu----------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=21 a=1 
------------------------------------------------------------------------------------------UAGCACCCACACCACUCCCGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=21 a=2 
------------------------------------------------------------------------------------------UAGCACCCACACCACUCCCGAa---------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=22 a=1 
------------------------------------------------------------------------------------------UAGCACCCACACCACUCCCGAGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=23 a=1 
------------------------------------------------------------------------------------------UAGCACCCACACCACUCCCGAGGu-------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=24 a=1 
------------------------------------------------------------------------------------------UAGCACCCACACCACUCCCGAGGCUU------------------------------------------------------------------------------------------------------------------------------------------------------------------ l=26 a=1 
-----------------------------------------------------------------------------------------------------------------CUUCAAAAAcCCGGAUAAAGAAGG--------------------------------------------------------------------------------------------------------------------------------------------- l=24 a=3 
-----------------------------------------------------------------------------------------------------------------CUUCAAAAAcCCGGAUAAAGAAGGC-------------------------------------------------------------------------------------------------------------------------------------------- l=25 a=3 
------------------------------------------------------------------------------------------------------------------UUCAAAAAcCCGGAUAAAGAAG---------------------------------------------------------------------------------------------------------------------------------------------- l=22 a=2 
------------------------------------------------------------------------------------------------------------------UUCAAAAAcCCGGAUAAAGAAGG--------------------------------------------------------------------------------------------------------------------------------------------- l=23 a=9 
------------------------------------------------------------------------------------------------------------------UUCAAAAAcCCGGAUAAAGAAGGC-------------------------------------------------------------------------------------------------------------------------------------------- l=24 a=3 
------------------------------------------------------------------------------------------------------------------UUCAAAAAcCCGGAUAAAGAAGGCA------------------------------------------------------------------------------------------------------------------------------------------- l=25 a=1 
------------------------------------------------------------------------------------------------------------------UUCAAAAAcCCGGAUAAAGAAGGCAG------------------------------------------------------------------------------------------------------------------------------------------ l=26 a=1 
------------------------------------------------------------------------------------------------------------------UUCAAAAAcCCGGAUAAAGAAGGCAGG----------------------------------------------------------------------------------------------------------------------------------------- l=27 a=2 
-------------------------------------------------------------------------------------------------------------------UCAAAAAcCCGGAUAAAGAAGG--------------------------------------------------------------------------------------------------------------------------------------------- l=22 a=1 
-------------------------------------------------------------------------------------------------------------------UCAAAAAcCCGGAUAAAGAAGGC-------------------------------------------------------------------------------------------------------------------------------------------- l=23 a=2 
---------------------------------------------------------------------------------------------------------------------AAAAAcCCGGAUAAAGAAGGCAG------------------------------------------------------------------------------------------------------------------------------------------ l=23 a=2 
----------------------------------------------------------------------------------------------------------------------AAAAcCCGGAUAAAGAAGGCA------------------------------------------------------------------------------------------------------------------------------------------- l=21 a=1 
----------------------------------------------------------------------------------------------------------------------AAAAcCCGGAUAAAGAAGGCAGG----------------------------------------------------------------------------------------------------------------------------------------- l=23 a=7 
----------------------------------------------------------------------------------------------------------------------AAAAcCCGGAUAAAGAAGGCAGGC---------------------------------------------------------------------------------------------------------------------------------------- l=24 a=2 
------------------------------------------------------------------------------------------------------------------------AAcCCGGAUAAAGAAGGCAGG----------------------------------------------------------------------------------------------------------------------------------------- l=21 a=2 
----------------------------------------------------------------------------------------------------------------------------CGGAUAAAGAAGGCAGGCGGCAAC---------------------------------------------------------------------------------------------------------------------------------- l=24 a=1 
----------------------------------------------------------------------------------------------------------------------------CGGAUAAAGAAGGCAGGCGGCAACG--------------------------------------------------------------------------------------------------------------------------------- l=25 a=2 
----------------------------------------------------------------------------------------------------------------------------CGGAUAAAGAAGGCAGGCGGCAACGc-------------------------------------------------------------------------------------------------------------------------------- l=26 a=1 
--------------------------------------------------------------------------------------------------------------------------------UAAAGAAGGCAGGCGGCAACGGg------------------------------------------------------------------------------------------------------------------------------- l=23 a=2 
------------------------------------------------------------------------------------------------------------------------------------------AGGCGGCAACGGCUAUAAAGAGG--------------------------------------------------------------------------------------------------------------------- l=23 a=1 
---------------------------------------------------------------------------------------------------------------------------------------------CGGCAACGGCUAUAAAGAGGGCACAG--------------------------------------------------------------------------------------------------------------- l=26 a=1 
-------------------------------------------------------------------------------------------------------------------------------------------------AACGGCUAUAAAGAGGGCACAGC-------------------------------------------------------------------------------------------------------------- l=23 a=6 
-------------------------------------------------------------------------------------------------------------------------------------------------AACGGCUAUAAAGAGGGCACAGg-------------------------------------------------------------------------------------------------------------- l=23 a=1 
-------------------------------------------------------------------------------------------------------------------------------------------------AACGGCUAUAAAGAGGGCACAGu-------------------------------------------------------------------------------------------------------------- l=23 a=2 
---------------------------------------------------------------------------------------------------------------------------------------------------------UAAAGAGGGCACAGCCCCACCGg------------------------------------------------------------------------------------------------------ l=23 a=1 
-----------------------------------------------------------------------------------------------------------------------------------------------------------------GCACAGCCCCACCGgUGCUCUCU---------------------------------------------------------------------------------------------- l=23 a=1 
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCCACCGgUGCUCUCUGACAAA---------------------------------------------------------------------------------------- l=23 a=1 
------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCACCGgUGCUCUCUGACAAAGAC------------------------------------------------------------------------------------- l=25 a=2 
------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCACCGgUGCUCUCUGACAAAGACC------------------------------------------------------------------------------------ l=26 a=2 
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCACCGgUGCUCUCUGACAAAGACC------------------------------------------------------------------------------------ l=25 a=1 
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACCGgUGCUCUCUGACAAAGACC------------------------------------------------------------------------------------ l=24 a=2 
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCGgUGCUCUCUGACAAAGACC------------------------------------------------------------------------------------ l=23 a=17 
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCGgUGCUCUCUGACAAAGACCA----------------------------------------------------------------------------------- l=24 a=2 
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCGgUGCUCUCUGACAAAGACCAAG--------------------------------------------------------------------------------- l=26 a=1 
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCGAUGCUCUCUGACAAAGACCAAGu-------------------------------------------------------------------------------- l=27 a=1 
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGgUGCUCUCUGACAAAGACCAA---------------------------------------------------------------------------------- l=24 a=1 
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGgUGCUCUCUGACAAAGACCAAG--------------------------------------------------------------------------------- l=25 a=2 
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGgUGCUCUCUGACAAAGACCAAGA-------------------------------------------------------------------------------- l=26 a=1 
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGgUGCUCUCUGACAAAGACCAA---------------------------------------------------------------------------------- l=23 a=3 
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GgUGCUCUCUGACAAAGACCAAGAG------------------------------------------------------------------------------- l=25 a=1 
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------gUGCUCUCUGACAAAGACCAAGA-------------------------------------------------------------------------------- l=23 a=1 
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UGCUCcCUGACAAAGACCAAG--------------------------------------------------------------------------------- l=21 a=1 
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UGCUCUCUGACAAAGACCAAG--------------------------------------------------------------------------------- l=21 a=1 
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UGCUCUCUGACAAAGACCAAGAGGC----------------------------------------------------------------------------- l=25 a=1 
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CUCUCUGACAAAGACCAAGAGGu----------------------------------------------------------------------------- l=23 a=1 
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UCUCUGACAAAGACCA----------------------------------------------------------------------------------- l=16 a=1 
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UCUCUGACAAAGACCAAGAGGu----------------------------------------------------------------------------- l=22 a=2 
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UCUCUGACAAAGACCAAGAGGCc---------------------------------------------------------------------------- l=23 a=2 
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UCUCUGACAAAGACCAAGAGGCU---------------------------------------------------------------------------- l=23 a=3 
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UCUCUGACAAAGACCAAGAGGCUC--------------------------------------------------------------------------- l=24 a=1 
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UCUCUGACAAAGACCAAGAGGCUCU-------------------------------------------------------------------------- l=25 a=1 
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UCUCUGACAAAGACCAAGAGGCUCc-------------------------------------------------------------------------- l=25 a=1 
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UCUCUGACAAAGACCAAGAGGCUCUU------------------------------------------------------------------------- l=26 a=1 
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UCUGACAAAGACCAAGAGGCU---------------------------------------------------------------------------- l=21 a=1 
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UCUGACAAAGACCAAGAGGCUu--------------------------------------------------------------------------- l=22 a=1 
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UCUGACAAAGACCAAGAGGCUC--------------------------------------------------------------------------- l=22 a=1 
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UCUGACAAAGACCAAGAGGCUCU-------------------------------------------------------------------------- l=23 a=2 
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UCUGACAAAGACCAAGAGGCUCc-------------------------------------------------------------------------- l=23 a=1 
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UCUGACAAAGACCAAGAGGCUCUg------------------------------------------------------------------------- l=24 a=1 
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UCUGACAAAGACCAAGAGGCUCUa------------------------------------------------------------------------- l=24 a=1 
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UCUGACAAAGACCAAGAGGCUCUU------------------------------------------------------------------------- l=24 a=6 
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UCUGACAAAGACCAAGAGGCUCUc------------------------------------------------------------------------- l=24 a=1 
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UGACAAAGACCAAGAGGCUC--------------------------------------------------------------------------- l=20 a=1 
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UGACAAAGACCAAGAGGCUCg-------------------------------------------------------------------------- l=21 a=2 
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UGACAAAGACCAAGAGGCUCU-------------------------------------------------------------------------- l=21 a=3 
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UGACAAAGACCAAGAGGCUgU-------------------------------------------------------------------------- l=21 a=1 
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UGACAAAGACCAAGAGGCUCUg------------------------------------------------------------------------- l=22 a=1 
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UGACAAAGACCAAGAGGCUCgU------------------------------------------------------------------------- l=22 a=1 
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UGACAAAGACCAAGAGGCUCUUa------------------------------------------------------------------------ l=23 a=3 
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UGACAAAGACCAAGAGGCUCUUg------------------------------------------------------------------------ l=23 a=2 
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UGACAAAGACCAAGAGGCUCUUUA----------------------------------------------------------------------- l=24 a=2 
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGACCAAGAGGCUCcUUAU---------------------------------------------------------------------- l=20 a=1 
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGACCAAGAGGCUCUUUAUGACGg----------------------------------------------------------------- l=25 a=1 
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGACCAAGAGGCUCUUUAUGACGA----------------------------------------------------------------- l=25 a=1 
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGACCAAGAGGCUCUUUAUGACGAG---------------------------------------------------------------- l=26 a=2 
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGACCAAGAGGCUCUUUAUGAa------------------------------------------------------------------- l=22 a=2 
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGACCAAGAGGCUCUUUAUGACGc----------------------------------------------------------------- l=24 a=1 
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGACCAAGAGGCUCUUUAUGACGA----------------------------------------------------------------- l=24 a=1 
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGACCAAGAGGCUCUUUAUGACGu----------------------------------------------------------------- l=24 a=1 
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCAAGAGGCUCUUUAUGACGAGA--------------------------------------------------------------- l=24 a=1 
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCAAGAGGCUCUUUAUGACGAGAU-------------------------------------------------------------- l=25 a=2 
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAAGAGGCUCUUUAUGACGAc---------------------------------------------------------------- l=22 a=1 
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAGAGGCUCUUUAUGACGAG---------------------------------------------------------------- l=21 a=3 
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGAGGCUCUUUAUGACGAGAUU------------------------------------------------------------- l=23 a=1 
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGCUCUUUAUGACGAGAUUaAGG--------------------------------------------------------- l=24 a=1 
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGCUCUUUAUGACGAGAUUaAGGCAU------------------------------------------------------ l=27 a=2 
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUUAUGACGAGAUUaAGGCA------------------------------------------------------- l=20 a=1 
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUUAUGACGAGAUUaAGGCAUAUU--------------------------------------------------- l=24 a=1 
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UAUGACGAGAUUaAGGCAUAUU--------------------------------------------------- l=22 a=1 
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UGACGAGAUUaAGGCAUAUUUAG------------------------------------------------ l=23 a=3 
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UGACGAGAUUaAGGCAUAUUUAGC----------------------------------------------- l=24 a=1 
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGAGAUUaAGGCAUAUUUAGC----------------------------------------------- l=21 a=1 
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUaAGGCAUAUUUAGCAGGG------------------------------------------- l=20 a=1 
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGCAUAUUUAGCAGGGCCAACu------------------------------------- l=23 a=1 
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAUAUUUAGCAGGGCCAACGGACU--------------------------------- l=24 a=2 
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAUAUUUAGCAGGGCCAACGGACa--------------------------------- l=24 a=1 
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAUAUUUAGCAGGGCCAACGGACUG-------------------------------- l=25 a=1 
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UAUUUAGCAGGGCCAACGGACU--------------------------------- l=22 a=1 
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UAUUUAGCAGGGCCAACGGACc--------------------------------- l=22 a=1 
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UAUUUAGCAGGGCCAACGGACUG-------------------------------- l=23 a=1 
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UAUUUAGCAGGGCCAACGGACUGUU------------------------------ l=25 a=4 
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UAUUUAGCAGGGCCAACGGACUGUc------------------------------ l=25 a=2 
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AUUUAGCAGGGCCAACGGACUGUU------------------------------ l=24 a=1 
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUUAGCAGGGCCAACGGACU--------------------------------- l=20 a=1 
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUUAGCAGGGCCAACGGACc--------------------------------- l=20 a=2 
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUUAGCAGGGCCAACGGACUc-------------------------------- l=21 a=1 
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUUAGCAGGGCCAACGGACUGU------------------------------- l=22 a=3 
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUUAGCAGGGCCAACGGACUGa------------------------------- l=22 a=2 
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUUAGCAGGGCCAACGGACUGUU------------------------------ l=23 a=35 (ma)
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUUAGCAGGGCCAACGGACUGUc------------------------------ l=23 a=5 
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUUAGCAGGGCCAACGGACUGgU------------------------------ l=23 a=5 
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUUAGCAGGGCCAACGGAuUGUU------------------------------ l=23 a=1 
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUUAGCAGGGCCAACGGACUGcU------------------------------ l=23 a=2 
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUAGCAGGGCCAACGGACUGU------------------------------- l=21 a=1 
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUAGCAGGGCCAACGGACUGgU------------------------------ l=22 a=1 
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUAGCAGGGCCAACGGACUGUU------------------------------ l=22 a=1 
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUAGCAGGGCCAACGGACUGUUUAu--------------------------- l=25 a=1 
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UAGCAGGGCCAACGGACUGU------------------------------- l=20 a=1 
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UAGCAGGGCCAACGGACUGgU------------------------------ l=21 a=4 
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UAGCAGGGCCAACGGACUGUU------------------------------ l=21 a=4 
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UAGCAGGGCCAACGGACUGUUUA---------------------------- l=23 a=2 
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UAGCAGGGCCAACGGACUGUUUAA--------------------------- l=24 a=2 
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UAGCAGGGCCAACGGACUGUUUAAAUG------------------------ l=27 a=1 
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UAGCAGGGCCAACGGACUGUUUAAAUGAC---------------------- l=29 a=1 
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UAGCAGGGCCAACGGACUGUUUAAAUGACCC-------------------- l=31 a=1 
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGGGCCAACGGACUGUUUAu--------------------------- l=23 a=2 
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGGGCCAACGGACUGUUUAAAU------------------------- l=24 a=1 
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGGGCCAACGGACUGUUUAAc-------------------------- l=22 a=1 
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGGGCCAACGGACUGUUUAAAU------------------------- l=23 a=1 
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGGGCCAACGGACUGUUUAAAUGA----------------------- l=25 a=1 
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGGGCCAACGGACUGUUUAAAUGACC--------------------- l=27 a=3 
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGGCCAACGGACUGUUUAAAUG------------------------ l=23 a=1 
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGGCCAACGGACUGUUUAAAUGgC---------------------- l=25 a=1 
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGGCCAACGGACUGUUUAAAUGAC---------------------- l=25 a=2 
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGGCCAACGGACUGUUUAAAUGACC--------------------- l=26 a=4 
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGGCCAgCGGACUGUUUAAAUGACC--------------------- l=26 a=1 
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGGCCAACGGACUGUUUAAAcGACC--------------------- l=26 a=1 
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGGCCAACGGACUGUUUAAAUGACu--------------------- l=26 a=2 
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCAACGGACUGUUUAAAUGAa---------------------- l=22 a=1 
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCAACGGACUGUUUAAAUGAC---------------------- l=22 a=3 
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCAACGGACUGUUUAAAUGACC--------------------- l=23 a=17 
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCAACGGACgGUUUAAAUGACC--------------------- l=23 a=1 
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCAACGGACUGUUUAAAUGACu--------------------- l=23 a=1 
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCAACGGACUGUUUAAAUGAuC--------------------- l=23 a=1 
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCAACGGACUGUUUAAAUGAaC--------------------- l=23 a=1 
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCAACGGACUGUUUAAAUGACa--------------------- l=23 a=1 
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------aCCAACGGACUGUUUAAAUGACC--------------------- l=23 a=1 
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCAACGGACUGUUUAAAUGACCC-------------------- l=24 a=1 
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCAACGGACUGUUUAAAUGACCCAG------------------ l=26 a=1 
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCAACGGACUGUUUAAAUGACCCAGG----------------- l=27 a=3 
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAACGGACUGUUUAAAUGACCCAGu----------------- l=26 a=1 
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAACGGACUGUUUAAAUGACCCAGGU---------------- l=27 a=1 
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACGGACUGUUUAAAUGACCCAGa----------------- l=25 a=1 
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACGGACUGUUUAAAUGACCaA------------------- l=22 a=1 
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACGGACUGUUUAAAUGACCCAu------------------ l=23 a=1 
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACGGACUGUUUAAAUGACCCAGa----------------- l=24 a=1 
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACGGACUGUUUAAAUGACCCAGG----------------- l=24 a=1 
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACGGACUGUUUAAAUGACCCAGGg---------------- l=25 a=2 
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACGGACUGUUUAAAUGACCCAGGU---------------- l=25 a=2 
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGGACUGUUUAAAUGACCu-------------------- l=20 a=1 
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGGACUGUUUAAAUGACCCAGG----------------- l=23 a=7 
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGGACUGUUUAAAUGACCCAGc----------------- l=23 a=5 
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGGACUGUUUAAAUGACCCgGG----------------- l=23 a=1 
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGGACUGUUUAAAUGACCCAGu----------------- l=23 a=3 
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGGACUGUUUAAAUGACCCAGGc---------------- l=24 a=3 
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGGACUGUUUAAAUGACCCAGGg---------------- l=24 a=1 
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGGACUGUUUAAAUGACCCAGGU---------------- l=24 a=2 
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGGACUGUUUAAAUGACCCAGGUU--------------- l=25 a=2 
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGGACUGUUUAAAUGACCCAGGUg--------------- l=25 a=2 
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGACUGUUUAAAUGACCCAGG----------------- l=22 a=3 
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGACUGUUUAAAUGACCCAGu----------------- l=22 a=1 
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UGUUUAAAUGACCCAGGUUGGu------------ l=22 a=1 
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUUAAAUGACCCAGGUUGGGA----------- l=21 a=2 
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUUAAAUGACCCAGGUUGGGAGG--------- l=23 a=2 
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UGACCCAGGUUGGGAGGAAUUAG--- l=23 a=1 
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UGACCCAGGUUGGGAGGAAUUAGu-- l=24 a=1 
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UGACCCAGGUUGGGAGGAAUUAGACG l=26 a=2 
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCAGGUUGGGAGGAAUUAGAa- l=22 a=1 

mb-00011
ax-1011011
ku-01
ss-101111011100
fn-101
